UTRef UTR General Information
Locus 3HSAR033574
Gene Name APP
Region 3'UTR
Organism Homo sapiens
Taxonomic Class Homo sapiens
Taxonomic ID 9606
Status Validated (polyA)
Exons 1
Length 1120bp
Source Accessions NM_001136130
Genomic Information
Genomic location chr21:26174732-26175851:-
Total length 1120bp
Features and Annotation
Signals
Feature key Position Genomic position Description Graphical view
APP_SCE 197..225 chr21:26175627-26175655:- Amyloid precursor protein mRNA stability control element (APP_SCE)
U0005
K-BOX 561..568 chr21:26175284-26175291:- K-Box (KB)
U0023
PAS 1097..1120 chr21:26174732-26174755:- Polyadenylation Signal (PAS)
U0043
miRNA -
Conserved Blocks
Feature key Position Genomic position Description Graphical view
- 11..474 chr21:26175378-26175841:- PhastConsElements17way
PhastConsElements17way
- 480..637 chr21:26175215-26175372:- PhastConsElements17way
PhastConsElements17way
- 647..722 chr21:26175130-26175205:- PhastConsElements17way
PhastConsElements17way
- 738..771 chr21:26175081-26175114:- PhastConsElements17way
PhastConsElements17way
- 780..885 chr21:26174967-26175072:- PhastConsElements17way
PhastConsElements17way
- 1042..1120 chr21:26174732-26174810:- PhastConsElements17way
PhastConsElements17way
Repeats
Type Family Position Genomic position Graphical view
AT_rich Low_complexity 843..864 chr21:26174988-26175009:-
AT_rich
SNP
Name Position Observed Class
rs45455403 590..590 A/C single
rs3200120 833..833 A/C single
rs736479 914..914 A/G single
rs1059461 937..937 A/G single
rs45541739 967..967 A/G single
rs1059478 1058..1058 A/G single
RNA Editing -
Sequence
FASTA
        1 acccccgcca cagcagcctc tgaagttgga cagcaaaacc attgcttcac tacccatcgg
       61 tgtccattta tagaataatg tgggaagaaa caaacccgtt ttatgattta ctcattatcg
      121 ccttttgaca gctgtgctgt aacacaagta gatgcctgaa cttgaattaa tccacacatc
      181 agtaatgtat tctatctctc tttacatttt ggtctctata ctacattatt aatgggtttt
      241 gtgtactgta aagaatttag ctgtatcaaa ctagtgcatg aatagattct ctcctgatta
      301 tttatcacat agccccttag ccagttgtat attattcttg tggtttgtga cccaattaag
      361 tcctacttta catatgcttt aagaatcgat gggggatgct tcatgtgaac gtgggagttc
      421 agctgcttct cttgcctaag tattcctttc ctgatcacta tgcattttaa agttaaacat
      481 ttttaagtat ttcagatgct ttagagagat tttttttcca tgactgcatt ttactgtaca
      541 gattgctgct tctgctatat ttgtgatata ggaattaaga ggatacacac gtttgtttct
      601 tcgtgcctgt tttatgtgca cacattaggc attgagactt caagcttttc tttttttgtc
      661 cacgtatctt tgggtctttg ataaagaaaa gaatccctgt tcattgtaag cacttttacg
      721 gggcgggtgg ggaggggtgc tctgctggtc ttcaattacc aagaattctc caaaacaatt
      781 ttctgcagga tgattgtaca gaatcattgc ttatgacatg atcgctttct acactgtatt
      841 acataaataa attaaataaa ataaccccgg gcaagacttt tctttgaagg atgactacag
      901 acattaaata atcgaagtaa ttttgggtgg ggagaagagg cagattcaat tttctttaac
      961 cagtctgaag tttcatttat gatacaaaag aagatgaaaa tggaagtggc aatataaggg
     1021 gatgaggaag gcatgcctgg acaaaccctt cttttaagat gtgtcttcaa tttgtataaa
     1081 atggtgtttt catgtaaata aatacattct tggaggagca 
Other
Related accessions CR485378 CR485381 CR485509 CR485384 CR485387