UTRef UTR General Information
Locus 3MMUR059721
Gene Name Tnf
Region 3'UTR
Organism Mus musculus
Taxonomic Class
Taxonomic ID 10090
Status Not validated
Exons 1
Length 755bp
Source Accessions NM_013693
Genomic Information
Genomic location chr17:35336335-35337089:-
Total length 755bp
Features and Annotation
Signals
Feature key Position Genomic position Description Graphical view
ARE2 420..461 chr17:35336629-35336670:- AU-rich class-2 Element (ARE2)
U0010
TNF 613..651 chr17:35336439-35336477:- Tumor necrosis factor alpha 3'UTR cis-acting element (TNF)
U0013
PAS 750..755 chr17:35336335-35336340:- Polyadenylation Signal (PAS)
U0043
miRNA -
Conserved Blocks
Feature key Position Genomic position Description Graphical view
- 419..469 chr17:35336621-35336671:- PhastConsElements30wayPlacental
PhastConsElements30wayPlacental
- 545..568 chr17:35336522-35336545:- PhastConsElements30wayPlacental
PhastConsElements30wayPlacental
- 630..651 chr17:35336439-35336460:- PhastConsElements30wayPlacental
PhastConsElements30wayPlacental
- 656..672 chr17:35336418-35336434:- PhastConsElements30wayPlacental
PhastConsElements30wayPlacental
- 677..755 chr17:35336335-35336413:- PhastConsElements30wayPlacental
PhastConsElements30wayPlacental
Repeats
Type Family Position Genomic position Graphical view
(TTTA)n Simple_repeat 438..489 chr17:35336601-35336652:-
(TTTA)n
SNP -
RNA Editing -
Sequence
FASTA
        1 agggaatggg tgttcatcca ttctctaccc agcccccact ctgacccctt tactctgacc
       61 cctttattgt ctactcctca gagcccccag tctgtatcct tctaacttag aaaggggatt
      121 atggctcagg gtccaactct gtgctcagag ctttcaacaa ctactcagaa acacaagatg
      181 ctgggacagt gacctggact gtgggcctct catgcaccac catcaaggac tcaaatgggc
      241 tttccgaatt cactggagcc tcgaatgtcc attcctgagt tctgcaaagg gagagtggtc
      301 aggttgcctc tgtctcagaa tgaggctgga taagatctca ggccttccta ccttcagacc
      361 tttccagatt cttccctgag gtgcaatgca cagccttcct cacagagcca gcccccctct
      421 atttatattt gcacttatta tttattattt atttattatt tatttatttg cttatgaatg
      481 tatttatttg gaaggccggg gtgtcctgga ggacccagtg tgggaagctg tcttcagaca
      541 gacatgtttt ctgtgaaaac ggagctgagc tgtccccacc tggcctctct accttgttgc
      601 ctcctctttt gcttatgttt aaaacaaaat atttatctaa cccaattgtc ttaataacgc
      661 tgatttggtg accaggctgt cgctacatca ctgaacctct gctccccacg ggagccgtga
      721 ctgtaatcgc cctacgggtc attgagagaa ataaa
Other
Related accessions CR179017