UTRsite motifs in 5'UTRs

 5' UTRef5' UTRef (Human)
UTRSite IDFeature KeyStandard NameNo of UTRsNo of MotifsNo of UTRsNo of Motifs
U0002IREIron Responsive Element (IRE)255225524747
U0011TOPTerminal Oligopyrimidine Tract (TOP)15367715367725572557
U0015IRESInternal Ribosome Entry Site (IRES)17763817763831953195
U0016SXL_BSSXL binding site (SXL_BS)875139784711341280
U0017UNR_BSUNR binding site (UNR_BS)17402518469626822798
U0018RPMS12_TCERibosomal S12 mitochondrial protein 5'UTR translation control element (RPMS12_TCE)141433
U0033uORFUpstream Open Reading Frame (uORF)220637148975804202090522
U0044PABP_ARSPABP mRNA autoregulatoy repression sequence (PABP_ARS)555522
U0045ApoB_CREApoB 5'UTR cis-acting regulatory element (ApoB_CRE)111122
TOTAL2801856551407051642100406

UTRsite motifs in 3'UTRs

 3' UTRef3' UTRef (Human)
UTRSite IDFeature KeyStandard NameNo of UTRsNo of MotifsNo of UTRsNo of Motifs
U0001HSL3Histone 3'UTR stem-loop structure (HSL3)347734805555
U0002IREIron Responsive Element (IRE)59056490225233
U0005APP_SCEAmyloid precursor protein mRNA stability control element (APP_SCE)5225221010
U0006CPECytoplasmic polyadenylation element (CPE)17537017537039563956
U0007TGETGE translational regulation element (TGE)81458154271271
U0008NANOS_TCENanos translation control element (NANOS_TCE)2200
U000915-LOX-DICE15-Lipoxygenase Differentiation Control Element (15-LOX-DICE)51035157179179
U0010ARE2AU-rich class-2 Element (ARE2)1507815243422430
U0012GLUT1Glusose transporter type-1 3'UTR cis-acting element (GLUT1)35893593125125
U0013TNFTumor necrosis factor alpha 3'UTR cis-acting element (TNF)262611
U0014VIM3Vimentin 3'UTR cis-acting element (VIM3)14514533
U0016SXL_BSSXL binding site (SXL_BS)4858295998591283716585
U0017UNR_BSUNR binding site (UNR_BS)4276104792231134612989
U0019BREBruno 3'UTR responsive element (BRE)1577115925464468
U0020ADH_DREAlcohol dehydrogenase 3'UTR downregulation control element (ADH_DRE)10025910348332533375
U0022PRONEURAL-BOXProneural Box (PB)21321311
U0023K-BOXK-Box (KB)7446768991611775823067
U0024BRD-BOXBrd-Box (Brd)4251914828181051112503
U0025GY-BOXGY-Box (GY)300468332305928010563
U0026AR_CUREAndrogen receptor CU-rich element (AR_CURE)20820833
U0027G3AElastin G3A 3'UTR stability motif (G3A)143514359090
U0028INS_SCEInsulin 3'UTR stability element (INS_SCE)24012401139139
U0029ACTIN_ZIP3Beta-actin 3'UTR zipcode (ACTIN_ZIP3)10810822
U0030GAP-43Gap-43 Stabilization Element (GAP-43)494922
U0031CNDLECaMKII/Ng dendritic localization element (CNDLE)828244
U0032AG-CRSDalpha-globin 3'UTR C-rich stability determinant (AG-CRSD)222222
U0034GAITGamma interferon activated inhibitor of translation (GAIT element)525222
U0035MBEMusashi binding element (MBE)34667111038614958566262170
U0036HLEDrosophila hairy mRNA localization element (HLE)2200
U0037MBP-A2RE11Myelin Basic Protein Localization Element (MBP-A2RE11)565666
U0038Protamine-YRSProtamine P1 3'UTR Y-Box recognition site (Protamine-YRS)212111
U0039G-CSF_SLDEGranulocyte colony-stimulating factor stem-loop destabilizing element (G-CSF_SLDE)666644
U0040Ren_SRERenin stability regulatory element (Ren_SRE)242411
U0041PTH1PTH 3'UTR proximal cis-acting instability element (PTH1)343411
U0042PTH2PTH 3'UTR distal cis-acting instability element (PTH2)343411
U0043PASPolyadenylation Signal (PAS)356432635643267935479354
U0046TPP_riboswitchThiamin pyrophosphate riboswitch (TPP_riboswitch)232300
U0049POLBDNA polymerase beta stem loopII regulatory element (POLB)10210288
U0050CAESARCis-Acting Element of Structure-Anchored Repression (CAESAR)14914911
U0051U1A_PIEU1A polyadenylation inhibition element (U1A_PIE)17618011
U0052bGlob_preBeta-globin pyrimidine rich element (bGlob_pre)70327052243243
U0053DMRT1_REDMRT1 regulatory element (DMRT1_RE)575995866914151470
U0054NRENanos response element (NRE)560385661811931204
U0055tropC_PLStroponin C perinuclear localization signal (tropC_PLS)269426969393
U0056TLSK10 Orb transport/localisation signal (TLS)141400
U0057WLE3Wingless localisation element 3 (WLE3)141400
U0058FLEfushi tarazu localization element (FLE)1100
U0059MYC_LEMYC mRNA localisation element (MYC_LE)143814516565
TOTAL987829017213207211894429681